Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACCCGACCCAGTATTGCAGG
(((((((((.(((((...(((&)))....)))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394339
GeneSymbolFAM153A
Binding site1662,1686
Score0.846
Seed1
Au0.368
Energy-17.6
Binding len24
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure