Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATGGCAACAGCAGCGGCAC
.(((.(((((.(((((..((.&))...))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394365
GeneSymbolSSBP3
Binding site1680,1701
Score0.846
Seed0
Au0.456
Energy-20.4
Binding len21
Me-10.737
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure