Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCAGGTGGCTGCGAT
(((((((((((((((......&))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394426
GeneSymbolSH2B2
Binding site115,135
Score0.923
Seed1
Au0.353
Energy-22.6
Binding len20
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end2
Position5UTR
2D Structure