Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCATAGCCCAGCTGCT
..(((((((.((((((.(((.&))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394474
GeneSymbolTAMM41
Binding site3358,3376
Score0.897
Seed1
Au0.471
Energy-22.4
Binding len18
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure