Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGGACCTTCAGATAGGCTGCAAA
((((((((....(((.(((((&.))))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394494
GeneSymbolFBXL13
Binding site2242,2270
Score0.846
Seed1
Au0.544
Energy-19.7
Binding len21
Me-12.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure