Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAGGACCGCAGTGAGCT
..((.(((((((((.(..(((&)))..).)))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394552
GeneSymbolBRD1
Binding site3688,3709
Score0.824
Seed0
Au0.412
Energy-22.2
Binding len21
Me-9.811
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure