Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTATTCTTTACAAAAATGTACATTGCCAGGTC
((((((((....(((((.((((&.)))).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001394565
GeneSymbolATPAF1
Binding site3786,3820
Score1.0
Seed1
Au0.632
Energy-19.5
Binding len20
Me-12.408
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure