Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGAGCATCGCATCCACGGATTCCTTTGCTTCCGCAGCAGAGCTTGCAGA
((((((((((((..((((((.&.))))))..)))))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394569
GeneSymbolMIGA1
Binding site1258,1311
Score0.846
Seed1
Au0.471
Energy-24.9
Binding len28
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure