Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCAGAGCTGCC
..((((((..((((((.....&))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394581
GeneSymbolDNAH3
Binding site385,400
Score0.923
Seed1
Au0.412
Energy-20.2
Binding len15
Me-7.256
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure