Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCAGCTGGTCTTATTCAGAGCTAATGTGGCTGTAAT
(((((((((((((((((((((&)))))))))))...................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394581
GeneSymbolDNAH3
Binding site2942,2983
Score0.846
Seed1
Au0.662
Energy-19.9
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings30
Pairings in 3prime end8
Position3UTR
2D Structure