Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCATAACATGGTCCTGCTTGTGACGGCTGCAAA
(((((((((((...((.(((.&.)))))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394582
GeneSymbolCCR6
Binding site1086,1121
Score0.923
Seed1
Au0.529
Energy-19.4
Binding len22
Me-9.43
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure