Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAATATCAGGCCGGGCCCGGGCGGCTGCGGCTGCGC
.(((((((((((((((..(((&.)))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394593
GeneSymbolC2CD4D
Binding site1008,1047
Score1.0
Seed1
Au0.221
Energy-28.7
Binding len23
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure