Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGATGCAGAACTGCAGCTGA
...((((((((((((((((((&))))...))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394644
GeneSymbolCCHCR1
Binding site1688,1712
Score0.923
Seed0
Au0.353
Energy-23.1
Binding len24
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure