Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGATAGTCACAGTCAAGGTTGGAGAGTCTCCTTCCAGCCAGTGA
(((((((((((((((((((((.&)))))))))...........)))).................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352798
GeneSymbolTACC1
Binding site5285,5335
Score0.923
Seed1
Au0.529
Energy-28.5
Binding len50
Me-3.938
Phylopstem-0.09470555918367349
Phylopflank0.2702480025000001
Longest consecutive pairings9
Position of longest consecutive pairings41
Pairings in 3prime end7
Position3UTR
2D Structure