Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAGCTCCTCAGCCTGCCCCTGGAGCCGCTGCAGC
(((((((.((((((((((((.&))))))))))..................)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394688
GeneSymbolDNAJC14
Binding site2396,2435
Score0.923
Seed1
Au0.368
Energy-21.5
Binding len39
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure