Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCGTTGCTTGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGCT
..((.((((((((((((((((&))))))))..............................)))...))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394689
GeneSymbolDNAJC14
Binding site1252,1305
Score0.846
Seed0
Au0.426
Energy-20.4
Binding len53
Me-9.076
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings45
Pairings in 3prime end8
PositionCDS
2D Structure