Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGAAATCAAATGCAACCGCACCCTGCGT
.(((((.((((((((((....&.))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394713
GeneSymbolPERM1
Binding site2888,2919
Score0.923
Seed0
Au0.485
Energy-22.2
Binding len19
Me-5.337
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure