Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGATGGAGACGGTGGGCTCCGACATCCGCAGCTGCC
..((((((((((.(((..((.&.)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394755
GeneSymbolTBKBP1
Binding site1789,1827
Score0.923
Seed1
Au0.324
Energy-26.6
Binding len19
Me-6.246
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure