Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGTTTGCAACACCAGCCTGTAGA
(((((((((..((((((((.(&).))))))))..)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001394802
GeneSymbolIPCEF1
Binding site3580,3603
Score0.846
Seed1
Au0.603
Energy-19.3
Binding len23
Me-8.005
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure