Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCATGGCTGCGGCTGG
...(((((((((((((..(((&)))..)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352825
GeneSymbolPLEKHM1
Binding site463,484
Score0.923
Seed0
Au0.324
Energy-22.6
Binding len21
Me-6.515
Phylopstem-0.23544389333333335
Phylopflank0.28949495000000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure