Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCACATAGCAGCAGCTGCT
..((((((((.(((((..(((&)))...))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352828
GeneSymbolST18
Binding site2625,2646
Score0.846
Seed1
Au0.441
Energy-22.4
Binding len21
Me-7.782
Phylopstem5.20072425
Phylopflank3.2739503037500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure