Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGAGCTACCACATTGTCCCTTGCCAGGC
.(((((((.(((((((......&.)))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001352831
GeneSymbolST18
Binding site3472,3500
Score0.923
Seed1
Au0.515
Energy-19.0
Binding len20
Me-4.85
Phylopstem2.708325142857143
Phylopflank3.5453311437500004
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end2
PositionCDS
2D Structure