Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTACAGCCCAAAAGCAGACTGCC
..(((((((((((((((..((&))..))))))).....)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352831
GeneSymbolST18
Binding site1066,1092
Score0.846
Seed1
Au0.456
Energy-20.3
Binding len26
Me-4.957
Phylopstem1.3538914761904763
Phylopflank1.4585049237500003
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure