Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACACAGCCGCTGCTACTTTGGGGGGTGGGGAAGGGGCCAAGCTGCAGA
((((((((((((((((..(((&)))...)))))))).............................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395
GeneSymbolDUSP9
Binding site2069,2121
Score0.846
Seed1
Au0.441
Energy-24.0
Binding len52
Me-3.938
Phylopstem0.14155718444444448
Phylopflank0.2251551899999999
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end6
Position3UTR
2D Structure