Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATACACCATTCTAGCTGCAAT
(((((((((.((.((((.(((&))).))))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352885
GeneSymbolSMIM31
Binding site731,755
Score0.846
Seed1
Au0.721
Energy-20.0
Binding len24
Me-6.469
Phylopstem-0.2254874111111111
Phylopflank0.01957099500000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure