Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCACCCCTATCCCCACTATTGTGGAATGCACGAAGGGACAGCTGGCAAAGGCAGTGA
(((((.(((((((((((((((.&)))))))............................)))))))...........).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352888
GeneSymbolCTXND1
Binding site2674,2735
Score0.846
Seed0
Au0.471
Energy-22.9
Binding len61
Me-5.839
Phylopstem-0.07428390925925925
Phylopflank-0.10811104874999998
Longest consecutive pairings7
Position of longest consecutive pairings54
Pairings in 3prime end7
Position3UTR
2D Structure