Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCATCCCCATCCAAGAGACCTGCAGCTGTGAA
((((((((((((((....((.&.))....)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352888
GeneSymbolCTXND1
Binding site2451,2488
Score1.0
Seed1
Au0.485
Energy-22.3
Binding len23
Me-4.906
Phylopstem0.01942856
Phylopflank-0.17975852375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure