Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGCTGGAGG
((.(((((((((..((((...&.))))..))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395273
GeneSymbolCCDC149
Binding site3481,3531
Score0.923
Seed0
Au0.426
Energy-23.5
Binding len20
Me-7.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure