Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAG
(((((((((((((((((((((&))))))))))).......................))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395273
GeneSymbolCCDC149
Binding site593,641
Score1.0
Seed1
Au0.456
Energy-23.2
Binding len48
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings37
Pairings in 3prime end8
PositionCDS
2D Structure