Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTGGAGGTGCAGCTGCAGG
(((((((((((.((.((((((&))).))).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395302
GeneSymbolPDE4DIP
Binding site3176,3199
Score0.923
Seed1
Au0.397
Energy-26.4
Binding len23
Me-8.02
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure