Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTACAACCCAGTTGCC
..(((((((.(((((((..((&))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395325
GeneSymbolPDE4DIP
Binding site6937,6956
Score0.846
Seed1
Au0.5
Energy-21.8
Binding len19
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure