Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTCAGCCCAGAAGTAGGTCTTAGAAACACTACAACCCAGTTGCC
..(((((((.(((((((..((&.))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395326
GeneSymbolPDE4DIP
Binding site6891,6938
Score0.923
Seed1
Au0.5
Energy-22.1
Binding len20
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure