Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCAGCCGGCTAGCCTGCGC
.((((((((((((((.((((.&)))).)))))).).))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395401
GeneSymbolMAGIX
Binding site1277,1300
Score0.846
Seed1
Au0.397
Energy-21.3
Binding len23
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure