Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGGTGGGCTGCTGCTCCAGCTGCTGCCCCTGCTGCCGCGGCTGCT
..(((((((((((.(((.(((&.)))..))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395406
GeneSymbolSCYGR5
Binding site85,133
Score1.0
Seed1
Au0.294
Energy-28.1
Binding len22
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure