Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTACTACAGGGTTTGAGACAACCGCAGCC
.....(((((((((((.....&.))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395414
GeneSymbolMUC22
Binding site1814,1847
Score0.923
Seed0
Au0.441
Energy-21.6
Binding len13
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure