Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGGCTGCAGAGTAATTCAGCGCATCCTAGAGCATTGCACTGCAGA
((((((((((((((((((((.&)))))))))))))).............................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352919
GeneSymbolPUM2
Binding site2696,2746
Score0.923
Seed1
Au0.544
Energy-23.9
Binding len50
Me-3.938
Phylopstem3.451442897959183
Phylopflank2.8054483400000003
Longest consecutive pairings14
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure