Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGGCGGCCCAGCTGTAC
.((((((((.((((((..(((&)))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395438
GeneSymbolPLSCR2
Binding site230,252
Score0.846
Seed1
Au0.353
Energy-23.3
Binding len22
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure