Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGTGGAGGTTGCAGTGA
(((((.(((((((((((((...&)))))))))..))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330589
GeneSymbolCPT2
Binding site2279,2304
Score0.846
Seed0
Au0.426
Energy-22.8
Binding len25
Me-5.839
Phylopstem0.48945792666666676
Phylopflank0.005711711249999994
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure