Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCAGAACACTAGCGGTTGCCGCAGGATCTGTGAACTTTGCAATGTGGCTGCAAG
((((((((((.((((((((((&.)))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352957
GeneSymbolSPIDR
Binding site2290,2350
Score0.923
Seed1
Au0.456
Energy-25.6
Binding len22
Me-6.762
Phylopstem-0.34979454
Phylopflank1.2118595275000004
Longest consecutive pairings20
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure