Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCCCACCCGACCAGCTGCAT
.(((((((((((.((...(((&)))...)).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352957
GeneSymbolSPIDR
Binding site2230,2253
Score0.923
Seed1
Au0.456
Energy-21.3
Binding len23
Me-5.316
Phylopstem1.1343810153846154
Phylopflank2.0911625875000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure