Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGGAGCTGCAGCAGCAC
.(((.(((((((((.(..(((&)))..).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395487
GeneSymbolNPIPA3
Binding site648,669
Score0.846
Seed0
Au0.426
Energy-22.4
Binding len21
Me-8.648
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure