Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCCCACCCGACCAGCTGCAT
.(((((((((((.((...(((&)))...)).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352959
GeneSymbolSPIDR
Binding site1188,1211
Score1.0
Seed1
Au0.456
Energy-21.3
Binding len23
Me-5.316
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure