Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAGGCTGGAGCTGCGC
.(((((((.(((((((.((((&)))))))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395505
GeneSymbolLOC400499
Binding site3714,3735
Score0.808
Seed1
Au0.368
Energy-24.0
Binding len21
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure