Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCATGCTGTG
..((((((((((((((.....&))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395513
GeneSymbolTMPRSS9
Binding site3188,3204
Score0.846
Seed1
Au0.338
Energy-23.7
Binding len16
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure