Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGCCCAGCTGTACTAAATTAGAAGCTGCAT
.((((((((((((((((((((&))))))...)))))))...........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395548
GeneSymbolPLA2G4E
Binding site4250,4285
Score0.846
Seed1
Au0.485
Energy-22.5
Binding len35
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end8
Position3UTR
2D Structure