Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAAAAGGTGGGCAAGGAGGTCAAGAACAGCTGCAGGCTGTG
..((((((((((((((.....&.)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395555
GeneSymbolH2AL3
Binding site257,302
Score1.0
Seed1
Au0.426
Energy-21.5
Binding len17
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure