Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATTATGTGCCAA
...(((((((.((((((((...&)))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001395587
GeneSymbolPCDH11Y
Binding site8014,8031
Score0.846
Seed0
Au0.676
Energy-18.1
Binding len17
Me-9.339
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure