Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGAATGGCCGCAGCCGTAT
.(((.(((((((((((((((.&))))...))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352964
GeneSymbolDENND1A
Binding site1971,1994
Score0.923
Seed0
Au0.426
Energy-22.7
Binding len23
Me-7.912
Phylopstem1.618895083333333
Phylopflank2.269639175
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure