Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAACCCATCCTGCAAA
((((((.((.((((((.((((&))))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395745
GeneSymbolPOU5F1B
Binding site1041,1062
Score0.923
Seed0
Au0.618
Energy-20.7
Binding len21
Me-6.724
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
Position5UTR
2D Structure