Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGGCCCTTGCTGCAGA
(((((((...(((((((....&)))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395745
GeneSymbolPOU5F1B
Binding site2598,2616
Score0.923
Seed1
Au0.485
Energy-20.0
Binding len18
Me-8.55
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure